The Gunnm: Complete Edition is a reprint of Gunnm by Shueisha that was published from December 1998 through August 2000. There are six total volumes published in a larger B5 size. The Complete Edition has a few changes and additions from the original manga:
- Ends the story after Alita was killed by Desty Nova's doll bomb to maintain continuity with her resurrection on Tiphares by Nova at the beginning of Last Order.
- Includes three chapters of Gunnm: Gaiden with the exception of Barjack Rhapsody, which was published in 2007.
- Includes supplemental material by Yukito Kishiro in the form of Gunnm Works in four of the volumes.
- Includes a DVD containing the Gunnm 3D special on Volume 6.
- Feature new CG covers by Kishiro.
- December 18, 1998 - Vol. 1
- February 19, 1999 - Vol. 2
- April 20, 1999 - Vol. 3
- August 20, 1999 - Vol. 4
- December 15, 1999 - Vol. 5
- August 18, 2000 - Vol. 6